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  4. The complete mitochondrial genome of a Peruvian creole cattle (Bos taurus) and its phylogenetic analysis
 
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The complete mitochondrial genome of a Peruvian creole cattle (Bos taurus) and its phylogenetic analysis

Date Issued
2023-02-09
Author(s)
Arbizu Berrocal, Carlos Irvin  
Ferro Mauricio, Rubén Darío  
Chavez Galarza, Julio César  
Vasquez Perez, Héctor Vladimir  
Maicelo Quintana, Jorge Luis  
Poemape Tuesta, Carlos Augusto  
Gonzáles, J.
Quilcate Pairazaman, Carlos Enrique  
Corredor Arizapana, Flor Anita  
DOI
https://doi.org/10.3920/978-90-8686-940-4_264
Abstract
The population of Peruvian creole cattle (PCC) is decreasing mainly due to the introduction of more productive breeds in recent years. We report the complete mitochondrial genome sequence of a PCC bull for the first time. This genome was 16,339 bp in length with the base composition 31.43% A, 28.64% T, 26.81% C, and 13.12% G. It contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and a control region. Among the 37 genes, 28 were positioned on the H-strand and 9 were positioned on the L-strand. The most frequently used codons were CUA (Leucine), AUA (Isoleucine), AUU (Isoleucine), AUC (Isoleucine) and ACA (Threonine). Maximum likelihood analysis clearly demonstrated that PCC are strongly related to a native African breed, giving insights into the maternal ancestry of PCC. The annotated mitochondrial genome of PCC would serve as an important genetic data set for further breeding work and conservation strategies.
Subjects

Mitocondrial

Genome

Cattle

Bos Taurus

Phylogenetic analysis...

File(s)
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Name

Arbizu_et-al_2023_cattle_genome.pdf

Size

1.16 MB

Format

Adobe PDF

Checksum

(MD5):426b2360b525fade0ab197c257776085



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